DICTY Archives

January 2021, Week 4

DICTY@LISTSERV.IT.NORTHWESTERN.EDU

Options: Use Monospaced Font
Show Text Part by Default
Show All Mail Headers

Message: [<< First] [< Prev] [Next >] [Last >>]
Topic: [<< First] [< Prev] [Next >] [Last >>]
Author: [<< First] [< Prev] [Next >] [Last >>]

Print Reply
Subject:
From:
Dictybase Northwestern <[log in to unmask]>
Reply To:
Date:
Fri, 22 Jan 2021 21:09:54 +0000
Content-Type:
text/plain
Parts/Attachments:
text/plain (1 lines)
dictyNews

Electronic Edition

Volume 47, number 2

January 22, 2021



Please submit abstracts of your papers as soon as they have been

accepted for publication by sending them to [log in to unmask]

or by using the form at

http://dictybase.org/db/cgi-bin/dictyBase/abstract_submit.



Back issues of dictyNews, the Dicty Reference database and other

useful information is available at dictyBase - http://dictybase.org.



Follow dictyBase on twitter:

http://twitter.com/dictybase





=========

Abstracts

=========





Kabra A and Kim L. 2020. 



Superoxide Dismutase C affects Dictyostelium Contractile Vacuole 

biogenesis and function. 





Differentiation, Growth, and Development. 62(9):516-526



Dictyostelium cells cope with hypo-osmotic stress with a 

Contractile Vacuole (CV) system, which consists of one or two 

vacuoles that cyclically charge and discharge. Uniquely, a 

F-Actin remodeling dependent minimal mixing of the CV membrane 

components with the target plasmalemma during the fusion and the 

dischargement warrants the integrity of the CV bladder for the 

efficient next CV cycle (Heuser, 2006). The effect of hypo-osmotic 

stress on F-Actin remodeling activity, however, is currently not 

well understood. Dictyostelium cells increase the level of 

intracellular superoxide level in response to hypo-osmotic stress, 

which in turn activates redox sensitive Ras proteins, but not Akt, 

which is one of the Ras downstream targets and a major regulator 

of F-Actin remodeling. However, Akt is not insulated from the 

active Ras in cells lacking Superoxide dismutase C (SodC). We 

report here that sodC- cells were compromised in the CV structure 

and function and the attenuation of Ras/PI3K/Akt signaling in 

several independent means significantly improved the compromised 

CV structure but not the function. Interestingly, when sodC- 

cells were treated with 5-(N,N-Dimethyl) amiloride hydrochloride 

(EIPA), an inhibitor of sodium proton exchanger (NHE), both the 

structure and the function of the CV improved. Thus, a proper CV 

biogenesis in sodC- cells was insufficient to restore their CV 

function, which in turn indicates the presence of an additional 

target for SodC and EIPA that modulates CV function. 





submitted by: Lou Kim [[log in to unmask]]

—————————————————————————————————————————————————





A hypothetical MEK1-MIP1-SMEK multiprotein signaling complex may 

function in Dictyostelium and mammalian cells.



Alex Sobko





Int. J. Dev. Biol. Publication date 2020/10/20



In a previous study, we characterized Dictyostelium SUMO targeted 

ubiquitin ligase (StUbL) MIP1 that associates with protein kinase 

MEK1 and targets SUMOylated MEK1 to ubiquitination (Sobko et al., 

2002). These modifications happen in response to activation of 

MEK1 by the chemoattractant cAMP. Second site genetic suppressor 

of mek1-null phenotype (SMEK) was also identified in Dictyostelium. 

MEK1 and SMEK belong to the same linear pathway, in which MEK1 

negatively regulates SMEK, which then negatively regulates 

chemotaxis and aggregation. RNF4 is mammalian homologue of MIP. 

RNF4 interacts with hSMEK2, the human homologue of Dictyostelium 

SMEK. We propose the existence of an evolutionarily conserved 

MEK1-SMEK signaling complex that upon MEK1 activation and 

SUMOylation, recruits ubiqutin ligase MIP1/RNF4, which, in turn, 

ubiquitinates SMEK and targets this protein for proteasomal 

degradation. This could be a mechanism for negative regulation 

of SMEK by MEK1 signaling.





submitted by: Alex Sobko [[log in to unmask]]

—————————————————————————————————————————————————





Unified control of amoeboid pseudopod extension in multiple organisms 

by branched F-actin in the front and parallel F-actin/myosin in the cortex 



Peter J.M. van Haastert



Department of Cell Biochemistry, University of Groningen, 

the Netherlands





PLoS One, doi.org/10.1371/journal.pone.0243442



The trajectory of moving eukaryotic cells depends on the kinetics 

and direction of extending pseudopods. The direction of pseudopods 

has been well studied to unravel mechanisms for chemotaxis, wound 

healing and inflammation. However, the kinetics of pseudopod 

extension – when and why do pseudopods start and stop- is equally 

important, but is largely unknown. Here the START and STOP of about 

4000 pseudopods was determined in four different species, at four 

conditions and in nine mutants (fast amoeboids Dictyostelium and 

neutrophils, slow mesenchymal stem cells, and fungus B.d. chytrid 

with pseudopod and a flagellum). The START of a first pseudopod is 

a random event with a probability that is species-specific 

(23%/s for neutrophils). In all species and conditions, the START of a 

second pseudopod is strongly inhibited by the extending first 

pseudopod, which depends on parallel filamentous actin/myosin in the 

cell cortex. Pseudopods extend at a constant rate by polymerization 

of branched F-actin at the pseudopod tip, which requires the Scar 

complex. The STOP of pseudopod extension is induced by multiple 

inhibitory processes that evolve during pseudopod extension and 

mainly depend on the increasing size of the pseudopod. Surprisingly, 

no differences in pseudopod kinetics are detectable between 

polarized, unpolarized or chemotactic cells, and also not between 

different species except for small differences in numerical values. 

This suggests that the analysis has uncovered the fundament of cell 

movement with distinct roles for stimulatory branched F-actin in the 

protrusion and inhibitory parallel F-actin in the contractile cortex.





submitted by: Peter van Haastert [[log in to unmask]]

—————————————————————————————————————————————————





Short- and long-term memory of moving amoeboid cells



Peter J.M. van Haastert



Department of Cell Biochemistry, University of Groningen, 

the Netherlands





PLoS One, accepted



Amoeboid cells constantly change shape and extend protrusions. 

The direction of movement is not random, but is correlated with the 

direction of movement in the preceding minutes. The basis of this 

correlation is an  underlying memory of direction. The presence of 

memory in movement is known for many decades, but its molecular 

mechanism is still largely unknown. This study reports in detail on 

the information content of directional memory, the kinetics of 

learning and forgetting this information, and the molecular basis 

for memory using Dictyostelium mutants. Two types of memory were 

characterized. A short-term memory stores for ~20 seconds the position 

of the last pseudopod using a local modification of the branched 

F-actin inducer SCAR/WAVE, which enhances one new pseudopod to 

be formed at the position of the previous pseudopod. A long term 

memory stores for ~2 minutes the activity of the last ~10 pseudopods 

using a cGMP-binding protein that induces myosin filaments in the rear 

of the cell; this inhibits pseudopods in the rear and thereby enhances 

pseudopods in the global front. Similar types of memory were 

identified in human neutrophils and mesenchymal stem cells, the 

protist Dictyostelium and the fungus B.d. chytrid. The synergy of 

short- and long-term memory explains their role in persistent movement 

for enhanced cell dispersal, food seeking and chemotaxis. 





submitted by: Peter van Haastert [[log in to unmask]]

—————————————————————————————————————————————————





Symmetry Breaking during Cell Movement in the Context of Excitability, 

Kinetic Fine-Tuning and Memory of Pseudopod Formation 



Peter J.M. van Haastert



Department of Cell Biochemistry, University of Groningen, 

the Netherlands; [log in to unmask]





Cells, doi.org/10.3390/cells9081809 Essay



The path of moving eukaryotic cells depends on the kinetics and 

direction of extending pseudopods. Amoeboid cells constantly change 

their shape with pseudopods extending in different directions. Detailed 

analysis has revealed that time, place and direction of pseudopod 

extension are not random, but highly ordered with strong prevalence for 

only one extending pseudopod, with defined life-times, and with 

reoccurring events in time and space indicative of memory. Important 

components are Ras activation and the formation of branched F-actin in 

the extending pseudopod and inhibition of pseudopod formation in the 

contractile cortex of parallel F-actin/myosin. In biology, order very 

often comes with symmetry. In this essay, I discuss cell movement and 

the dynamics of pseudopod extension from the perspective of symmetry 

and symmetry changes of Ras activation and the formation of branched 

F-actin in the extending pseudopod. Combining symmetry of Ras activation 

with kinetics and memory of pseudopod extension results in a refined 

model of amoeboid movement that appears to be largely conserved in the 

fast moving Dictyostelium and neutrophils, the slow moving mesenchymal 

stem cells and the fungus B.d. chytrid.





submitted by: Peter van Haastert [[log in to unmask]]

=======================================================

[End dictyNews, volume 47, number 2]




ATOM RSS1 RSS2