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dictyNews
Electronic Edition
Volume 40, number 10
April 4, 2014

Please submit abstracts of your papers as soon as they have been
accepted for publication by by using the form at
http://dictybase.org/db/cgi-bin/dictyBase/abstract_submit or by sending 
them to [log in to unmask]

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=========
Abstracts
=========


The IQGAP-related protein DGAP1 mediates signaling to the actin 
cytoskeleton as an effector and a sequestrator of Rac1 GTPases

Vedrana Filic, Maja Marinovic, Jan Faix, Igor Weber


Cellular and Molecular Life Sciences, in press
http://link.springer.com/article/10.1007%2Fs00018-014-1606-3

Proteins are typically categorized into protein families based on their 
domain organization. Yet, evolutionarily unrelated proteins can also 
be grouped together according to their common functional roles. 
Sequestering proteins constitute one such functional class, acting as 
macromolecular buffers and serving as an intracellular reservoir 
ready to release large quantities of bound proteins or other molecules 
upon appropriate stimulation. Another functional protein class 
comprises effector proteins, which constitute essential components of 
many intracellular signal transduction pathways. For instance, effectors 
of small GTP-hydrolases are activated upon binding a GTP-bound 
GTPase and thereupon participate in downstream interactions. Here 
we describe a member of the IQGAP family of scaffolding proteins, 
DGAP1 from Dictyostelium, which unifies the roles of an effector and 
a sequestrator in regard to the small GTPase Rac1. Unlike classical 
effectors, which bind their activators transiently leading to short-lived 
signaling complexes, interaction between DGAP1 and Rac1-GTP is 
stable and induces formation of a complex with actin-bundling proteins 
cortexillins at the back end of the cell. An oppositely localized Rac1 
effector, the Scar/WAVE complex, promotes actin polymerization at the 
cell front. Competition between DGAP1 and Scar/WAVE for the common 
activator Rac1-GTP might provide the basis for the oscillatory re-
polarization typically seen in randomly migrating Dictyostelium cells. We 
discuss the consequencesof the dual roles exerted by DGAP1 and Rac1 
in the regulation of cell motility and polarity, and propose that similar 
signaling mechanisms may be of general importance in regulating 
spatiotemporal dynamics of the actin cytoskeleton by small GTPases.


Submitted by Vedrana Filic  [[log in to unmask]]]
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Pore-forming toxins from pathogenic amoebae.

Leippe M.


Appl Microbiol Biotechnol. 2014 Mar 28. 
[Epub ahead of print], DOI: 10.1007/s00253-014-5673-z 

Some amoeboid protozoans are facultative or obligate parasites in 
humans and bear an enormous cytotoxic potential that can result in 
severe destruction of host tissues and fatal diseases. Pathogenic 
amoebae produce soluble pore-forming polypeptides that bind to 
prokaryotic and eukaryotic target cell membranes and generate pores 
upon insertion and oligomerization. This review summerizes the 
current knowledge of such small protein toxins from amoebae, 
compares them with related proteins from other species, focuses on 
their three-dimensional structures, and gives insights into divergent 
activation mechanisms. The potential use of pore-forming toxins in 
biotechnology will be briefly outlined.


Submitted by Matthias Leippe [[log in to unmask]]
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Requirements for Hirano Body formation.  

Paul Griffin, Ruth Furukawa, Cleveland Piggott, Andrew Maselli, 
and Marcus Fechheimer.  


Eukaryotic Cell, In press


Hirano bodies are paracrystalline F-actin-rich structures associated with 
diverse conditions including neurodegeneration and aging.  Generation 
of model Hirano bodies using altered forms of Dictyostelium 34 kDa actin-
bundling protein allows studies of their physiological function and 
mechanism of formation. We describe a novel 34 kDa protein mutant, 
E60K, with a point mutation within the inhibitory domain of 34 kDa protein. 
Expression of E60K in Dictyostelium induces formation of model Hirano 
bodies.  The E60K protein has activated actin binding and is calcium-
regulated unlike other forms of the 34 kDa protein that induce Hirano 
bodies that have activated actin binding but lack calcium-regulation. Actin 
filaments in the presence of E60K in vitro show enhanced resistance to 
disassembly induced by latrunculin B. Actin filaments in model Hirano 
bodies are also protected from latrunculin induced depolymerization.   
We used nocodazole and blebbistatin to probe the role of the microtubules 
and myosin II, respectively, in formation of model Hirano bodies. In the 
presence of these inhibitors, model Hirano bodies can form, but are smaller 
than control at early times of formation.  The ultrastructure of model Hirano 
bodies did not reveal any major difference in the structure and organization 
in the presence of inhibitors. In summary, these results support the 
conclusion that formation of model Hirano bodies is promoted by gain-of-
function actin filament bundling which enhances actin filament stabilization. 
Microtubules and myosin II contribute to but are not required for formation 
of model Hirano bodies.


Submitted by Ruth Furukawa [[log in to unmask]]
---------------------------------------------------------------------------


The association of myosin IB with actin waves in Dictyostelium requires both 
the plasma membrane-binding site and actin-binding region in the myosin tail

Hanna Brzeska1*, Kevin Pridham1, Godefroy Chery1, Margaret A. Titus2 
and Edward D. Korn1

1 Laboratory of Cell Biology, National Heart, Lung, and Blood Institute, National 
Institutes of Health, Bethesda, Maryland, United States of America, 
2 Department of Genetics, Cell Biology and Development, University of Minnesota, 
Minneapolis, Minnesota, United States of America.
*E-mail: [log in to unmask]


PLOS ONE, accepted

F-actin structures and their distribution are important determinants of the dynamic 
shapes and functions of eukaryotic cells.  Actin waves are F-actin formations that 
move along the ventral cell membrane driven by actin polymerization.  
Dictyostelium myosin IB is associated with actin waves but its role in the wave is 
unknown.  Myosin IB is a monomeric, non-filamentous myosin with a globular 
head that binds to F-actin and has motor activity, and a non-helical tail comprising 
a basic region, a glycine-proline-glutamine-rich region and an SH3-domain.  The 
basic region binds to acidic phospholipids in the plasma membrane through a 
short basic-hydrophobic site and the Gly-Pro-Gln region binds F-actin.  In the 
current work we found that both the basic-hydrophobic site in the basic region and 
the Gly-Pro-Gln region of the tail are required for the association of myosin IB with 
actin waves.  This is the first evidence that the Gly-Pro-Gln region is required for 
localization of myosin IB to a specific actin structure in situ.  The head is not 
required for myosin IB association with actin waves but binding of the head to 
F-actin strengthens the association of myosin IB with waves and stabilizes waves.  
Neither the SH3-domain nor motor activity is required for association of myosin IB 
with actin waves.  We conclude that myosin IB contributes to anchoring actin 
waves to the plasma membranes by binding of the basic-hydrophobic site to 
acidic phospholipids in the plasma membrane and binding of the Gly-Pro-Gln 
region to F-actin in the wave. 


Submitted by Hanna Brzeska [[log in to unmask]]
---------------------------------------------------------------------------


Protection of spores from ultraviolet-C irradiation by auto-fluorescent substances 
in the spore mass of the cellular slime mold Dictyostelium discoideum

Saburo Uchiyama and Ikuo Hatakeyama

Graduate School of Education, Iwate University, Morioka 020-8550, Japan


Pteridines, accepted

In this study, native spores surrounded by fluorescent substances in the spore 
mass of Dictyostelium discoideum were found to be resistant to relatively strong 
ultraviolet-C (UV-C) irradiation (2880 J/m2). The remaining emergency activity of 
the native mass of spores was over 80% even after exposure to strong UV-C 
irradiation (2880 J/m2). On the other hand, the washed spores were very sensitive 
to weak UV-C irradiation (144 J/m2). The mass of spores in the fruiting body 
formed by amoebae with a low concentration of fluorescent substances was less 
resistant to UV-C compared to that in the fruiting body formed by normally grown 
amoebae. Based on the remaining emergency activity of washed spores with 
appropriate lumazine solution, the concentration of fluorescent substances in the 
native mass of spores was estimated to be  equivalent to approximately 
5 mmol/L lumazine.


Submitted by Saburo Uchiyama [[log in to unmask]]
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[End dictyNews, volume 40, number 10]

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