A lot of the numbers ring a bell, many of them were used in Rick's lab
by Sandy Mann and Mona Mehdy and others. Rick may remember some.
best
wolfgang
Am 08.12.2011 12:23, schrieb Jeffrey Williams:
> Dear Petra and Daphne,
>
> Its very useful to tie up loose ends like this. I looked at the list and the only name that strikes a faint chord is indeed PL1. However, I cant honestly recall the conversation with Daphne - 30 years is a major challenge for my personal search engine.
>
>
> Best
>
>
> Jeff
>
> Professor Jeff Williams FRSE
> University of Dundee
> Wellcome Trust Building
> Dow St
> Dundee
> DD1 5EH
> 01382 385823
>
>
>>>> Daphne Blumberg 12/07/11 10:24 PM>>>
> Hi Petra,
>
> D18 and D14 and PL1 were old Lodish lab clones. I know that I did not
> sequence D18 or D14 --- it is possible that Rex might have sequenced
> D14 and I have a vague recollection that someone and I thought it was
> Rex told me that it was an actin gene. PL1 was one that we
> originally called B1 and I think that Jeff Williams 30 years ago told
> me that it was EcmA or B and I dont remember which but here is a list
> of old Lodish lab cDNA clone that I do have gene names for
>
> C5 is rpL11 DDB_G0279189
> D3 is rpS9 DDB_G0289877
> C3 is rpL23 DDB_G0290315
> A3 or PL3 is pspD DDB_G0277379
> D7 is DDB_G0284613
> D19 is psa DDB_G0267412
>
> Best,
> Daphne
>
> At 04:13 PM 12/7/2011, you wrote:
>> Dear Colleagues,
>>
>> There are several papers from the 80ies and early 90ies (PMID
>> 2556709, PMID: 3470762, PMID: 3109983 and many more) that talk about
>> clones or mRNAs, but most often we do not have those names in
>> dictyBase. We know of course pDd56/63, and we have the name 14E6 for
>> pspB, D19 for pspA, and D11 for ampA. I also found 2H3 seems to be a
>> terminator probe for cotC. But there are more names that I have a
>> hard time to match and it would be nice to add those so our users
>> can find them, and for us to link those papers to the correct genes.
>>
>> - 2H6 (pst/psp - is it lvsB/ DDB_G0271504??)
>> - 10C3 (not cell type specific)
>> - D18 (psp)
>> - 7E3 (psp)
>> - 12H5 (psp)
>> - 15H3 (psp)
>> - D14 (pst
>> - PL1 (pst)
>> - 16G1 (pst
>> - 18G1 (pst)
>>
>> There are probably more - feel free to add.
>>
>> Thanks a lot for your help.
>>
>> Holiday greetings,
>> Petra
>>
>> ------------------------------------------------------
>> Petra Fey
>> dictyBase Scientific Curator& Dicty Stock Center Manager
>> Northwestern University
>> Biomedical Informatics Center/NUCATS
>> 750 N. Lake Shore Drive, 11-190
>> Chicago, IL 60611
>> USA
>>
>> [log in to unmask]
>> http://dictybase.org/
>> ------------------------------------------------------
> Dr. Daphne D. Blumberg, Ph.D.
> Associate Professor
> Biological Sciences
> University of Maryland, Baltimore County
> 1000 Hilltop Circle
> Baltimore, Maryland 21250
> phone 410-455-2242
> fax 410-455-3875
> e-mail [log in to unmask]
>
>
> ************************************************************
> Please consider the environment. Do you really need to print this email?
>
--
Wolfgang Nellen
Abt. Genetik
Univ. Kassel
Heinrich-Plett-Str. 40
34132 Kassel, Germany
phone: (++49) 561 8044805
fax: (++49) 561 8044800
mobile: (++49) 17665620661
[log in to unmask]
http://www.biologie.uni-kassel.de/genetics/
http://www.sciencebridge.net
http://www.vbio.de/
|
