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Fri, 28 Feb 2014 22:25:12 +0000
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dictyNews
Electronic Edition
Volume 40, number 7
February 28, 2014

Please submit abstracts of your papers as soon as they have been
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http://dictybase.org/db/cgi-bin/dictyBase/abstract_submit.

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=========
Abstracts
=========


Properties of a non-bioactive fluorescent derivative of differentiation-
inducing factor-3, an anti-tumor agent found in Dictyostelium discoideum

Yuzuru Kubohara 1, Haruhisa Kikuchi 2, Yusuke Matsuo 2, Yoshiteru 
Oshima 2 and Yoshimi Homma 3

1 Department of Molecular and Cellular Biology, Institute for Molecular 
and Cellular Regulation, Gunma University, Maebashi 371-8512, Japan
2 Laboratory of Natural Product Chemistry, Tohoku University Graduate 
School of Pharmaceutical Sciences, Sendai 980-8578, Japan
3 Department of Biomolecular Science, Institute of Biomedical Sciences,
 Fukushima Medical University School of Medicine, Fukushima 
  960-1295, Japan


Biology Open, in press

Differentiation-inducing factor-3 (DIF-3), found in the cellular slime mold 
Dictyostelium discoideum, and its derivatives such as butoxy-DIF-3 
(Bu-DIF-3) are potent anti-tumor agents. To investigate the activity of DIF-
like molecules in tumor cells, we recently synthesized a green fluorescent 
DIF-3 derivative, BODIPY-DIF-3G, and analyzed its bioactivity and cellular 
localization. In this study, we synthesized a red (orange) fluorescent DIF-3 
derivative, BODIPY-DIF-3R, and compared the cellular localization and 
bioactivities of the two BODIPY-DIF-3s in HeLa human cervical cancer 
cells. Both fluorescent compounds penetrated the extracellular membrane 
within 0.5 h and localized mainly to the mitochondria. In formalin-fixed cells, 
the two BODIPY-DIF-3s also localized to the mitochondria, indicating that 
the BODIPY-DIF-3s were incorporated into mitochondria independently of 
the mitochondrial membrane potential. After treatment for 3 days, BODIPY-
DIF-3G, but not BODIPY-DIF-3R, induced mitochondrial swelling and 
suppressed cell proliferation. Interestingly, the swollen mitochondria were 
stainable with BODIPY-DIF-3G but not with BODIPY-DIF-3R. When added 
to isolated mitochondria in vitro, BOIDPY-DIF-3G dose-dependently 
increased the rate of O2 consumption, but BODIPY-DIF-3R did not. These 
results suggest that the bioactive BODIPY-DIF-3G suppresses cell 
proliferation at least in part by altering mitochondrial activity, whereas the 
non-bioactive BODIPY-DIF-3R localizes to the mitochondria but does not 
affect mitochondrial activity or cell proliferation.


Submitted by Yuzuru Kubohara [[log in to unmask]]
---------------------------------------------------------------------------


N-glycomic profiling of a glucosidase II mutant of Dictyostelium discoideum 
by 'off-line' liquid chromatography and mass spectrometry.

Hykollari A, Dragosits M, Rendic D, Wilson IBH, Paschinger K.

Electrophoresis. 2014 Feb 26. doi: 10.1002/elps.201300612. 
[Epub ahead of print]

In this study, we have performed the first mass spectrometric analysis of 
N-glycans of the M31 mutant strain of the cellular slime mould Dictyostelium 
discoideum, previously shown to have a defect in glucosidase II. Together 
with glucosidase I, this enzyme mediates part of the initial processing of 
N-glycans; defects in either glucosidase are associated with human diseases 
and result in an accumulation of incorrectly-processed oligosaccharides 
which are not, or only poor, substrates for a range of downstream enzymes. 
To examine the effect of the glucosidase II mutation in Dictyostelium, we 
employed off-line LC-MALDI-TOF-MS in combination with chemical and 
enzymatic treatments and MS/MS to analyse the neutral and anionic 
N-glycans of the mutant as compared to the wild-type. The major neutral 
species were, as expected, of the composition Hex10-11 HexNAc2-3 with 
one or two terminal glucose residues. Consistent with the block in processing 
of neutral N-glycans caused by the absence of glucosidase II, fucose was 
apparently absent from the N-glycans and bisecting N-acetylglucosamine 
was rare. The major anionic oligosaccharides were sulphated and/or 
methylphosphorylated forms of Hex8-11 HexNAc2-3 , many of which 
surprisingly lacked glucose residues entirely. As anionic N-glycans are 
considered to be mostly associated with lysosomal enzymes in Dictyostelium, 
we hypothesise that glycosidases present in the acidic compartments may 
act on the oligosaccharides attached to such slime mould proteins. 
Furthermore, our chosen analytical approach enabled us, via observation of 
diagnostic negative-mode MS/MS fragments, to determine the fine structure 
of the methylphosphorylated and sulphated N-glycans of the M31 
glucosidase mutant in their native state. 

This article is protected by copyright. All rights reserved.


Submitted by Iain Wilson [[log in to unmask]]
==============================================================
[End dictyNews, volume 40, number 7]

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