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dictyNews

Electronic Edition

Volume 47, number 23

November 19, 2021



Please submit abstracts of your papers as soon as they have been

accepted for publication by sending them to [log in to unmask]

or by using the form at

http://dictybase.org/db/cgi-bin/dictyBase/abstract_submit.



Back issues of dictyNews, the Dicty Reference database and other

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=========

Abstracts

=========





Derivatives of Dictyostelium differentiation-inducing factors 

suppress the growth of Plasmodium parasites in vitro and in vivo.



Toshihiro Mita 1, Makoto Hirai 1, Yoshiko Maki 1, Saifun Nahar 1, 

Naoko Yoshida 1, Yoshiteru Oshima 2, Haruhisa Kikuchi 3, 

Yuzuru Kubohara 4



1 Department of Tropical Medicine and Parasitology, Faculty of 

Medicine, Juntendo University, 2-1-1 Hongo, Bunkyo-ku, 

Tokyo 113-8421, Japan

2 Head Office for Open Innovation Strategy, Tohoku University, 

2-1 Seiryo-machi, Aoba-ku, Sendai 980-8575, Japan

3 Laboratory of Natural Product Chemistry, Graduate School of 

Pharmaceutical Sciences, Tohoku University, 6-3, Aza-Aoba, 

Aoba-ku, Sendai 980-8578, Japan

4 Laboratory of Health and Life Science, Graduate School of 

Health and Sports Science, Juntendo University, Inzai, 

Chiba 270-1695, Japan





Biochemical Pharmacology, in press.



Malaria, which is caused by protozoa of the genus Plasmodium , 

remains a major endemic public health problem worldwide. 

Since artemisinin combination therapies are used as a first-line 

treatment in all endemic regions, the emergence of parasites 

resistant to these regimens has become a serious problem. 

Differentiation-inducing factor 1 (DIF-1) is a chlorinated 

alkylphenone originally found in the cellular slime mold 

Dictyostelium discoideum . DIF-1 and its derivatives exhibit a 

range of biological activities. In the present study, we investigated 

the effects of 41 DIF derivatives on the growth of Plasmodium

 falciparum in vitro using four laboratory strains and 12 field

 isolates. Micromolar concentrations of several DIF derivatives 

strongly suppressed the growth of the four laboratory strains, 

including strains that exhibited resistance to chloroquine and 

artemisinin, as well as strains that were susceptible to these 

drugs. In addition, DIF-1(+2), the most potent derivative, strongly 

suppressed the growth of 12 field isolates. We also examined the 

effects of DIF-1(+2) on the activity of the rodent malarial parasite 

Plasmodium berghei in mice. Intraperitoneal administration of 

DIF-1(+2) over 7 days (50 or 70 mg/kg / day) significantly 

suppressed the growth of the parasite in the blood with no 

apparent adverse effects, and a dose of 70 mg/kg / day 

significantly prolonged animal survival. These results suggest 

that DIF derivatives, such as DIF-1(+2), could serve as new 

lead compounds for the development of antimalarial agents.



 

Submitted by Yuzuru Kubohara [[log in to unmask]]

——————————————————————————————————————





Moving the research forward: The best of British biology using the 

tractable model system Dictyostelium discoideum



Robin S.B. Williams1, Jonathan R. Chubb2*, Robert Insall3*, 

Jason S. King4*, Catherine J. Pears5*, Elinor Thompson6* and 

Cornelis J. Weijer7*



1	Centre for Biomedical Sciences, School of Biological Sciences, 

Royal Holloway University of London, Eg-ham, TW20 0EX, UK; 

[log in to unmask]

2 	MRC Laboratory for Molecular Cell Biology, University College 

London, Gower Street, London, WC1E 6BT, UK; [log in to unmask]

3	Institute of Cancer Sciences, University of Glasgow Switchback 

Road, Bearsden, Glasgow G61 1QH, UK; [log in to unmask]

4. 	School of Biosciences, University of Sheffield, Firth Court, 

Western Bank, Sheffield, S10 2TN, UK; [log in to unmask]

5 	Department of Biochemistry, University of Oxford, South Parks 

Road, Oxford, OX1 3QU, UK; [log in to unmask]

6 	School of Science, University of Greenwich, Chatham Maritime, 

ME4 4TB, UK; [log in to unmask]

7 	Division of Cell and Developmental Biology, School of Life 

Sciences, University of Dundee, DD1 5EH, UK; [log in to unmask]

*	These authors contributed equally to the work 





Cells, 10, 3036. https://doi.org/10.3390/cells10113036



The social amoeba Dictyostelium discoideum provides an excellent model 

for research in a broad range of disciplines within biology. The organism 

diverged from the plant, yeast, fungi and animal kingdoms around 1 billion 

years ago, but retains common aspects found in these kingdom.  

Dictyostelium has a low level of genetic complexity and provides a range 

of molecular, cellular, biochemical and developmental biology experimental 

techniques that enables a wide range of research in disparate areas, and 

thus multidisciplinary studies leading to research breakthroughs. Numerous 

laboratories within the United Kingdom employ Dictyostelium as their core 

research model. This review will introduce Dictyostelium, and then highlight 

research from several leading British research laboratories, covering their 

distinct areas of research, the benefits of using the model, and the 

breakthroughs that have arisen due to the use of Dictyostelium as a 

tractable model system.





Submitted by Robin Williams [[log in to unmask]]

———————————————————————————————————————





Decanoic Acid Stimulates Autophagy in D. discoideum



Eleanor C. Warren, Pavol Kramár, Katie Lloyd-Jones and 

Robin S.B. Williams*



Centre for Biomedical Sciences, Department of Biological Sciences, 

Royal Holloway University of London, Egham TW20 0EX, UK





Cells, 10(11), 2946, https://doi.org/10.3390/cells10112946



Ketogenic diets, used in epilepsy treatment, are considered to work through 

reduced glucose and ketone generation to regulate a range of cellular 

process including autophagy induction. Recent studies into the medium-chain

 triglyceride (MCT) ketogenic diet have suggested that medium-chain fatty 

acids (MCFAs) provided in the diet, decanoic acid and octanoic acid, cause 

specific therapeutic effects independent of glucose reduction, although a role 

in autophagy has not been investigated. Both autophagy and MCFAs have 

been widely studied in Dictyostelium, with findings providing important 

advances in the study of autophagy-related pathologies such as 

neurodegenerative diseases. Here, we utilize this model to analyze a role 

for MCFAs in regulating autophagy. We show that treatment with decanoic 

acid but not octanoic acid induces autophagosome formation and modulates 

autophagic flux in high glucose conditions. To investigate this effect, 

decanoic acid, but not octanoic acid, was found to induce the expression of 

autophagy-inducing proteins (Atg1 and Atg8), providing a mechanism for 

this effect. Finally, we demonstrate a range of related fatty acid derivatives 

with seizure control activity, 4BCCA, 4EOA, and Epilim (valproic acid), also 

function to induce autophagosome formation in this model. Thus, our data 

suggest that decanoic acid and related compounds may provide a 

less-restrictive therapeutic approach to activate autophagy.





Submitted by Robin Williams [[log in to unmask]]

————————————————————————————————————————





Evolution of a novel cell type in Dictyostelia  required gene duplication of 

a cudA-liketranscription factor



Koryu Kin1,2a, Zhi-Hui Chen1a, Gillian Forbes1, and Pauline Schaap1*



1 University of Dundee, School of Life Sciences, Dow Street, Dundee, 

DD1 5EH, United Kingdom

2Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra), Passeig 

Marítim de la Barceloneta 37-49, 08003 Barcelona, Spain





Current Biology, in press



The evolution of novel cell types has been proposed to result from 

duplication of gene regulatory networks, but proven examples are rare. 

In addition to stalk cells and spores that make up the fruiting bodies of 

three major groups of Dictyostelia, those in Group 4 additionally evolved 

basal disc and cup cells that respectively anchor the stalk to the 

substratum and the spore mass to the stalk. We noted a putative Group 

4 specific duplication of a cudA-like transcription factor (TF) in a 

comparative analysis of group-representative genomes. Using increased 

taxon sampling, we here confirmed that this TF, cdl1, duplicated into 

cdl1a and cdl1b in the common ancestor to Group 4. cdl1a but not cdl1b 

showed signatures of positive selection, indicative of functional innovation. 

Deletion of cdl1a in Dictyostelium discoideum resulted in fruiting bodies 

with sagging spore heads that lacked the supporting cup cells and 

expression of cup-specific genes. Deletion of cdl1b resulted in thinner 

fruiting body stalks, while a cdl1b-cdl1a- double knock-out showed more 

severe stalk defects, suggesting an ancestral role of cdl1 in stalk 

formation. This was confirmed in a closely related non-Group 4 species, 

Polysphondylium violaceum, where cdl1 knock-out caused defective 

stalk formation. These data indicate that the group-specific duplication 

of cdl1 and subsequent diversification of cdl1a played a pivotal role in 

the evolution of a novel somatic cell type in Group 4 Dictyostelia.





submitted by: Pauline Schaap [[log in to unmask]]

=======================================================

[End dictyNews, volume 47, number 23]




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