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April 2015, Week 4

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dictyNews
Electronic Edition
Volume 41, number 8
April 24, 2015

Please submit abstracts of your papers as soon as they have been
accepted for publication by using the form at
http://dictybase.org/db/cgi-bin/dictyBase/abstract_submit.

Back issues of dictyNews, the Dicty Reference database and other
useful information is available at dictyBase - http://dictybase.org.

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=========
Abstracts
=========

The phenotypes of ATG9, ATG16 and ATG9/16 knock-out mutants 
imply autophagy-dependent and -independent functions

Qiuhong Xiong1, Can Ünal2,3, Jan Matthias1, Michael Steinert2,4 
and Ludwig Eichinger1

1 Zentrum für Biochemie, Medizinische Fakultät, Universität 
zu Köln, Joseph-Stelzmann-Str. 52, D-50931 Köln
2 Institut für Mikrobiologie, Technische Universität Braunschweig, 
Spielmannstr. 7, D-38106 Braunschweig
3 Fen Fakültesi, Türk-Alman-Üniversitesi, 34820, Istanbul, Turkey
4 Helmholtz Centre for Infection Research, 38124, 
Braunschweig, Germany


Open Biol. 2015 Apr;5(4). pii: 150008. doi: 10.1098/rsob.150008.

Macroautophagy is a highly conserved intracellular bulk 
degradation system of all eukaryotic cells. It is governed by a 
large number of autophagy proteins (ATGs) and is crucial for many 
cellular processes. Here, we describe the phenotypes of 
Dictyostelium discoideum ATG16(-) and ATG9(-)/16(-) cells and 
compare them to the previously reported ATG9(-) mutant. ATG16 
deficiency caused an increase in the expression of several core 
autophagy genes, among them atg9 and the two atg8 paralogues. 
The single and double ATG9 and ATG16 knock-out mutants had 
complex phenotypes and displayed severe and comparable defects 
in pinocytosis and phagocytosis. Uptake of Legionella pneumophila 
was reduced. In addition, ATG9(-) and ATG16(-) cells had dramatic 
defects in autophagy, development and proteasomal activity which 
were much more severe in the ATG9(-)/16(-) double mutant. Mutant 
cells showed an increase in poly-ubiquitinated proteins and 
contained large ubiquitin-positive protein aggregates which 
partially co-localized with ATG16-GFP in ATG9(-)/16(-) cells. The 
more severe autophagic, developmental and proteasomal 
phenotypes of ATG9(-)/16(-) cells imply that ATG9 and ATG16 
probably function in parallel in autophagy and have in addition 
autophagy-independent functions in further cellular processes.

Submitted by Ludwig Eichinger [[log in to unmask]] 
----------------------------------------------------------------------


Evolution of centrosomes and the nuclear lamina: Amoebozoan 
assets

Ralph Gräf, Petros Batsios and Irene Meyer

Universität Potsdam, Institut für Biochemie und Biologie, 
Potsdam-Golm, Germany.

Eur. J. Cell Biol., in press

The current eukaryotic tree of life groups most eukaryotes 
into one of five supergroups, the Opisthokonta, Amoebozoa, 
Archaeplastida, Excavata and SAR (Stramenopile, Alveolata, 
Rhizaria). Molecular and comparative morphological analyses 
revealed that the last eukaryotic common ancestor (LECA) 
already contained a rather sophisticated equipment of 
organelles including a mitochondrion, an endomembrane system, 
a nucleus with a lamina, a microtubule-organizing center 
(MTOC), and a flagellar apparatus. Recent studies of MTOCs, 
basal bodies/centrioles, and nuclear envelope organization 
of organisms in different supergroups have clarified our 
picture of how the nucleus and MTOCs co-evolved from LECA 
to extant eukaryotes. In this review we summarize these 
findings with special emphasis on valuable contributions 
of research on a lamin-like protein, nuclear envelope 
proteins, and the MTOC in the amoebozoan model organism 
Dictyostelium discoideum.


Submitted by Ralph Gräf [[log in to unmask]]
==============================================================
[End dictyNews, volume 41, number 8]

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